arXiv Machine Learning

Truncated automatic sparse differentiation for machine learning interatomic potentials

The paper introduces truncated automatic sparse differentiation (ASD) to efficiently compute higher‑order derivatives, such as Hessians, for machine learning interatomic potentials (MLIPs). By exploiting the locality of atomic interactions, ASD identifies a sparsity pattern that allows exact Hessian calculation for large porous materials, while truncated ASD discards distant, small Hessian entries to achieve order‑of‑magnitude speedups with minimal loss in predictive accuracy. The authors demonstrate these methods on several foundational MLIPs, showing modest speedups for full ASD and significant gains for the truncated approach.

arXiv Machine Learning
Sep 7

Hessian-based molecular conformation augmentation for a scalable and efficient strategy of machine learning interatomic potentials

The paper introduces two Hessian-based data augmentation techniques—UniAug and ModeAug—to improve machine‑learning interatomic potentials (MLIPs). These methods use simple Taylor expansions to generate augmented configurations without modifying training objectives or increasing computational overhead. Experiments on both non‑equilibrium and equilibrium datasets show that the augmentations enhance model accuracy and provide practical guidelines for specific tasks.

By Bumju Kwak, Jeonghee Jo
arXiv Machine Learning
Aug 24

HIP: Hessian Interatomic Potentials without derivatives

arXiv:2509.21624v4 Announce Type: replace Abstract: Molecular Hessians, the second derivatives of the potential energy, are fundamental to many workflows in computational chemistry. Usually, accurate...

By Andreas Burger, Luca Thiede, Nikolaj R{\o}nne, Varinia Bernales, Nandita Vijaykumar, Tejs Vegge, Arghya Bhowmik, Alan Aspuru-Guzik
arXiv Machine Learning
Jun 30

Shoot from the HIP: Hessian Interatomic Potentials without derivatives

arXiv:2509. 21624v3 Announce Type: replace Abstract: Fundamental tasks in computational chemistry, from transition state search to vibrational analysis, rely on molecular Hessians, which are the second derivatives of the potential energy.

By Andreas Burger, Luca Thiede, Nikolaj R{\o}nne, Varinia Bernales, Nandita Vijaykumar, Tejs Vegge, Arghya Bhowmik, Alan Aspuru-Guzik
arXiv Machine Learning
Jun 25

A Zeroth-Order Deep Learning Method for Fully Nonlinear Parabolic Partial Differential Equations with Unknown Coefficients

arXiv:2606. 24999v1 Announce Type: new Abstract: High-dimensional partial differential equations (PDEs) with unknown coefficients arise widely in scientific machine learning, including continuous-time reinforcement learning, yet solving them efficiently in a data-driven way remains challenging.

By Yanwei Jia, Du Ouyang, Huy\^en Pham, Xun Yu Zhou
arXiv AI
Jun 2

From Evaluation to Design: Using Potential Energy Surface Smoothness Metrics to Guide Machine Learning Interatomic Potential Architectures

arXiv:2602. 04861v2 Announce Type: replace-cross Abstract: Machine Learning Interatomic Potentials (MLIPs) sometimes fail to reproduce the physical smoothness of the quantum potential energy surface (PES), leading to erroneous behavior in downstream simulations that standard energy and force regression evaluations can miss.

By Ryan Liu, Eric Qu, Tobias Kreiman, Samuel M. Blau, Aditi S. Krishnapriyan
arXiv AI
Sep 17

BOOM: Benchmarking Out-Of-distribution Molecular Property Predictions of Machine Learning Models

BOOM is a new benchmark for evaluating out‑of‑distribution (OOD) molecular property predictions in machine learning. It provides chemically‑informed tests across common property prediction tasks and assesses over 150 model‑task combinations. The study shows that current models, including chemical foundation models, struggle to generalize OOD, with the best model still exhibiting three times higher error than in‑distribution predictions.

By Evan R. Antoniuk, Shehtab Zaman, Tal Ben-Nun, Peggy Li, James Diffenderfer, Busra Sahin, Obadiah Smolenski, Everett Grethel, Tim Hsu, Anna M. Hiszpanski, Kenneth Chiu, Bhavya Kailkhura, Brian Van Essen
arXiv Machine Learning
Sep 17

ADAPT: Lightweight, Long-Range Machine Learning Force Fields Without Graphs

The paper introduces ADAPT, a lightweight machine‑learning force field that replaces graph neural networks with a direct coordinates‑in‑space Transformer encoder to model all pairwise atomic interactions. Applied to silicon point defects, ADAPT reduces force prediction error by about 22% and energy prediction error by roughly 40% compared to a state‑of‑the‑art GNN model, while also cutting computational cost. This approach addresses common GNN issues such as oversmoothing, oversquashing, and poor long‑range interaction representation, which are especially problematic for point defect modeling.

By Evan Dramko, Yihuang Xiong, Yizhi Zhu, Geoffroy Hautier, Thomas Reps, Christopher Jermaine, Anastasios Kyrillidis
arXiv Machine Learning
2d ago

Surprisingly High Redundancy in Electronic Structure Data Across Materials Explained by Low Intrinsic Dimensionality

arXiv:2507.09001v4 Announce Type: replace-cross Abstract: Machine learning (ML) models for electronic structure typically rely on large datasets generated by computationally expensive Kohn-Sham densi...

By Sazzad Hossain, Ponkrshnan Thiagarajan, Shashank Pathrudkar, Stephanie Taylor, Abhijeet S. Gangan, Amartya S. Banerjee, Susanta Ghosh