arXiv AI

From Specification to Execution: AI Assisted Scientific Workflow Management

arXiv:2606. 18425v1 Announce Type: cross Abstract: Scientific workflow management systems (WMS) support scalable and reproducible execution of complex pipelines, but workflow design, implementation, and debugging remain largely manual and require significant expertise.

arXiv AI
Sep 10

Complexity and Scale in AI-Assisted Workflow Management: A Federated Learning Case Study

The paper investigates the use of a large language model (LLM) agent to automate the creation and execution of a federated learning workflow for medical image analysis. By generating a reviewable specification of constraints and acceptance criteria, the LLM produces an executable workflow, while a validation loop repairs failures and ensures conformance to the specification. Experiments on the FABRIC testbed demonstrate that the approach can detect silent errors—such as a run that trained 1,700 jobs on random tensors—that traditional failure-driven debugging would miss.

By Komal Thareja, Hamza Safri, Rajiv Mayani, Anirban Mandal, Ewa Deelman
arXiv Machine Learning
Sep 25

LabFactory: Building and Evaluating Executable AI Labs

LabFactory is a framework that transforms a scientific brief into an executable AI lab, integrating models, knowledge resources, tools, and a controller behind a fixed interface. The builder packages the lab in a metered workspace, and a separate host evaluates the delivered artifact on held‑out inputs, ensuring the system itself is the evaluation target. Across 28 constructions in seven scientific domains, the delivered labs surpassed reference values on all 33 subtests, demonstrating that an AI agent can fully realize a scientific brief into a working, inspectable lab.

By Jinge Wu, Hongjian Zhou, Mingde Zeng, Jiayuan Zhu, Junde Wu, Jiazhen Pan, Lei Clifton, Andrew Liu, David A. Clifton
arXiv AI
3d ago

OSWorld-Science: A Benchmark of Computer Use Agents for Learning and Using Scientific Software

OSWorld-Science is a benchmark and evaluation environment for computer-using agents that use visual language models (VLMs) to perform scientific software tasks. It includes 12 VLMs and 146 high-quality tasks across domains such as molecular drawing, pathology image analysis, statistical computing, and physical simulation, with artifact-based evaluation and a harness that logs interactions and supports model comparison. The benchmark was developed through expert proposals and iterative human–AI co‑design, and results show that current VLMs still struggle with key scientific questions, offering insights into factors like language, reasoning, and context length.

By Dingyuan Dai, Heli Qi, Lei Liu, Yinxi Li, Baiding Chen, Zijun Dou, Qingcheng Zeng, Qi Kang, Oliver Sun, Eric Wang, Bo Zhou, Haixin Wang, Yufan Du, Shi Bo, Ruihan Lin, Mengqi Yuan, Dunjie Lu, Steven Dillmann, Yiming Shi, Tina Su, Amy Xin, Minghao Liu, Xi Wang, Xu Huang, Ge Zhang, Pengyu Nie, Zhen Yang, Jie Tang, Juanzi Li, Weihao Xuan, Tianyu Liu
arXiv AI
Jul 7

Gypscie: A Cross-Platform AI Artifact Management System

arXiv:2604. 10311v2 Announce Type: replace Abstract: Artificial Intelligence (AI) models, encompassing both traditional machine learning (ML) and more advanced approaches such as deep learning and large language models (LLMs), play a central role in modern applications.

By Fabio Porto, Eduardo Ogasawara, Gabriela Moraes Botaro, Julia Neumann Bastos, Augusto Fonseca, Esther Pacitti, Patrick Valduriez