arXiv Machine Learning

Persistent Homology as a Theory of Emergent Structure

arXiv:2507. 03065v2 Announce Type: replace Abstract: Why do some macroscopic structures remain identifiable even though their microscopic constituents continually change?

arXiv Machine Learning
Sep 17

Persistent Magnitude Homology for Quantitative Equational Theories

The paper introduces persistent magnitude homology as a functorial invariant for quantitative equational theories, providing a barcode that captures the metric structure of the free algebra generated by a metric space of generators. It shows how this invariant combines graded magnitude homology with persistence, yielding stability estimates and a method to compare barcodes when theories are extended. Four concrete examples illustrate the theory in each homological degree.

By Luciano Melodia
arXiv Machine Learning
Sep 17

Transformation Laws in Neural Representations: Structure, Realisability, and Construction

The paper investigates how neural representations maintain the structure of input changes, linking representation analysis with internal interventions. It characterises when transformations can be applied through an encoder, providing linear settings where defects depend on discarded information and detailing failure modes for rectifiers and harmonic carriers. Using colour as a case study, the authors show that hue orbits in frozen visual features concentrate most energy in the first two harmonics, that this structure is inherited from input and architecture, and that a compact, fixed‑action interface can read hue zero‑shot with low error on unseen shapes.

By Yuan Sun
arXiv Machine Learning
Jun 11

From Persistence to Survival: Hypothesis Testing, Effect Sizes and Vectorisation for Topological Features

arXiv:2606. 11911v1 Announce Type: cross Abstract: Persistence diagrams are common representations in topological data analysis, but they do not naturally live in a vector space, and the statistical tools developed for comparing them have largely evolved separately from those used for downstream prediction.

By Juliette Murris, Bernadette Stolz, Karsten Borgwardt
arXiv Machine Learning
Jun 16

Learning Topological Representations for Molecular Dynamics

arXiv:2606. 14737v1 Announce Type: cross Abstract: Molecular dynamics (MD) simulations generate trajectories in a high-dimensional configuration space whose analysis critically depends on molecular descriptors, typically handcrafted observables or learned kinetic embeddings.

By Dominik Geng, Florian Graf, Martin Uray, Roland Kwitt
arXiv Machine Learning
Aug 5

Topological Simplification in Predictive Coding Networks

arXiv:2608. 02816v1 Announce Type: new Abstract: We study the topology of learned representations in predictive coding networks (PCNs), a neuro-inspired bidirectional architecture, using a quantitative layer-wise persistent homology analysis.

By Adam Shaw, Jiayu Li, Michael Sperling, Michael Kim, Alvin Jin
arXiv AI
Jun 15

Learning Developmental Scaffoldings to Guide Self-Organisation

arXiv:2605. 14998v3 Announce Type: replace Abstract: From subcellular structures to entire organisms, many natural systems generate complex organisation through self-organisation: local interactions that collectively give rise to global structure without any blueprint of the outcome.

By Milton L. Montero, Elias Najarro, Jakob Schauser, Sebastian Risi