Bio‑VQA is a new, large-scale visual question answering benchmark for biology, comprising 1.86 million questions over 217 k images from 11 datasets. It tests four key aspects of biological visual understanding—taxonomic reasoning, attribute grounding, spatial reasoning, and individual re‑identification—using a graded scoring system that rewards near‑misses more than distant ones. Evaluation of 18 open‑weight vision‑language models shows that general visual capabilities do not transfer well to biological tasks, with markedly lower accuracy on counting, taxonomy, trait measurement, and re‑identification compared to everyday object benchmarks.
By S M Rayeed, Qian Ma, Charles V. Stewart, Yao Ma
arXiv:2606. 25989v1 Announce Type: cross Abstract: Automated classification of marine species from underwater imagery is essential for scalable ocean biodiversity monitoring and conservation policy.
By Dan Zimmerman, Dimitris A. Pados, George Sklivanitis
The paper audits zero‑shot vision‑language models—CLIP, BioCLIP, BioCLIP2, and a multilingual Jina CLIP v2—on 10,321 images of seven Bangladeshi freshwater fish species. BioCLIP2 achieves the highest accuracy (72.36% on BFF‑15 with English common names and 68.91% on SylFishBD with scientific names), while generic CLIP lags far behind (25.15% and 14.40%). The study also shows that Bengali prompts perform poorly, that Jina CLIP partially improves Bengali discrimination, and that image context (blur, masking) affects performance differently across species.
By Nazim-E-Alam, Tarek Rahman, Md Kishor Morol
The study benchmarks Vision Transformers (ViTs) against convolutional neural networks (CNNs) for fine‑grained orchid genus identification in New Guinea’s species‑rich, data‑poor flora. Using a two‑stage system that first predicts genus and then retrieves similar species images, the authors fine‑tuned four pretrained backbones on 16,701 photographs from 120 genera and 1,350 species. The self‑supervised ViT DINOv2 achieved the highest genus accuracy (macro top‑1 66.9 %) and outperformed both CNNs and a domain‑matched pretrained ViT, demonstrating strong species retrieval and open‑set detection capabilities.
By Reza Saputra, Diah Harnoni Apriyanti, Andr\'e Schuiteman, Kurt Metzger, Ashley Field, Katharina Nargar, William Edwards
arXiv:2609.23397v1 Announce Type: new
Abstract: Shrimp diseases continue to cause devastating losses in the aquaculture industry, driving a critical need for robust, automated detection. This work co...
By Vinh Canh-Thanh Truong, Hai-Binh Pham, Ngoc Hong Tran
arXiv:2603. 16351v2 Announce Type: replace-cross Abstract: Accurate taxonomic identification of parasitoid wasps within the superfamily Ichneumonoidea is essential for biodiversity assessment, ecological monitoring, and biological control programs.
By Joao Manoel Herrera Pinheiro, Gabriela Do Nascimento Herrera, Alvaro Doria Dos Santos, Luciana Bueno Dos Reis Fernandes, Ricardo V. Godoy, Eduardo A. B. Almeida, Helena Carolina Onody, Marcelo Andrade Da Costa Vieira, Angelica Maria Penteado-Dias, Marcelo Becker
arXiv:2512. 15748v2 Announce Type: replace Abstract: Visual Species Recognition (VSR) is a fundamental task in scientific disciplines that require species-level identification, including ecology, palynology, evolutionary biology, systematics, and phylogenetics.
By Tian Liu, Anwesha Basu, James Caverlee, Shu Kong
arXiv:2606. 18302v1 Announce Type: cross Abstract: Correct identification of fish species is highly significant for food security, economic development, and climate resilience in Bangladesh.
By Md Nasiat Hasan Fahim, Md. Abid Ullah Muhib, Mohammad Shahidur Rahman
FieldGuideRAG is a training‑free GraphRAG approach that uses a frozen vision‑language model to recognize fine‑grained species by comparing a query image to photographs stored on each species node in a knowledge graph. The graph links species to relatives, geographic range, and ecological facts, and the system fuses verification scores with range edges to answer organism‑related questions. On datasets such as CUB‑200 and iNaturalist, FieldGuideRAG’s use of node photographs improves verification over species names, surpasses a SigLIP retriever by up to 16 points, and achieves up to 89.5% accuracy on ecological questions.
By Jiacheng Ding, Yanliang Qi, Cong Guo, Peihua Mai
arXiv:2607. 15698v1 Announce Type: cross Abstract: We propose and evaluate three hierarchical ensemble setups for zebrafish phenotype classification from embryo images.
By Piotr S. Maci\k{a}g, Monika Maci\k{a}g, Magdalena Majdan
arXiv:2608. 09360v1 Announce Type: cross Abstract: The demand for maritime surveillance has given rise to the need for monitoring fishing vessel activities, particularly in addressing the challenge of "dark vessels" that operate without Automatic Identification System (AIS) transmission.
By Shantakar Mohanty, Prasun Kumar Gupta, Raian Vargas Maretto
arXiv:2607. 09443v1 Announce Type: cross Abstract: Long-term animal re-identification (ReID) must remain robust to gradual morphological evolution and seasonal appearance shifts.
By Anil Osman Tur, Tonje Knutsen Sordalen, Kim Tallaksen Halvorsen, Cigdem Beyan