arXiv Machine Learning By Prabhav Singh, Xiheng Tom Wang, Haojun Shi, Jason Eisner

Marformer: A Transformer for Predicting Missing Data Distributions

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The Marformer is a Transformer model designed to predict conditional marginal distributions of missing variables given observed data, enabling computation of Bayes risk and Value of Information. It learns a hidden-vector representation for each variable’s distribution and refines these through attention, similar to BERT’s masked language modeling but for probabilistic inference. Evaluations on synthetic Bayesian networks, discretized Gaussians, structured annotation data, and a real annotation dataset show that the Marformer matches or surpasses classical missing-data methods while being faster and not requiring explicit joint distribution modeling.

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arXiv Machine Learning
Aug 19

One Pipeline, Many Transformers: Pattern-Specific Imputation Specialists for Tabular Missing Data

The paper introduces a pre‑training pipeline that creates transformer‑based imputation specialists for tabular data with specific missingness patterns. By featurizing entries, generating synthetic data with configurable missingness modules, and fitting on millions of synthetic tables, the pipeline produces pattern‑specific models that outperform dedicated methods for each missingness pattern. A default model trained only on MCAR data, TabImpute, remains robust across all tested patterns, and the authors release the pipeline, models, and a new benchmark of 42 datasets and 11 missingness patterns.

By Jacob Feitelberg, Dwaipayan Saha, Kyuseong Choi, Zaid Ahmad, Anish Agarwal, Raaz Dwivedi
arXiv Machine Learning
Jul 2

Deep learning with missing data

arXiv:2504. 15388v3 Announce Type: replace-cross Abstract: In the context of multivariate nonparametric regression with missing covariates, we propose Pattern Embedded Neural Networks (PENNs), which can be applied in conjunction with any existing imputation technique.

By Tianyi Ma, Tengyao Wang, Richard J. Samworth