arXiv:2607. 11508v1 Announce Type: cross Abstract: Causal discovery, the process of recovering underlying causal structures from observational data, is a fundamental pursuit across scientific disciplines.
By Jie Qiao, Ruichu Cai, Zijian Li, Weilin Chen, Pengfei Hua, Boyan Xu, Zhengming Chen, Zhifeng Hao, Peng Cui
arXiv:2606. 00483v1 Announce Type: cross Abstract: Genotype-based cis-expression prediction depends on accurately modeling local regulatory architecture.
By Lei Huang, Hui Shen, Kuan-Jui Su, Chuan Qiu, Martha Isabel Gonzalez-Ramirez, Anqi Liu, Zhe Luo, Yun Gong, Yipu Zhang, Dawei Li, Chaoyang Zhang, Hong-Wen Deng
arXiv:2606. 18535v1 Announce Type: cross Abstract: Multi-cause observational studies contain information about unmeasured confounding through the dependence structure among causes.
By Yordan P. Raykov, Hengrui Luo, Justin D. Strait, Wasiur R. KhudaBukhsh
arXiv:2601. 14590v3 Announce Type: replace Abstract: Counterfactual explanations (CFEs) provide human-centric interpretability by identifying the minimal, actionable changes required to alter a machine learning model's prediction.
By Shovito Barua Soumma, Asiful Arefeen, Stephanie M. Carpenter, Melanie Hingle, Hassan Ghasemzadeh
arXiv:2607. 19618v1 Announce Type: cross Abstract: Genomic language models achieve strong performance across regulatory-genomics tasks, yet what these models internally represent remains opaque, and the field lacks a principled procedure for verifying that an apparent ``concept'' inside a model is real rather than an artifact of sequence composition.
By Sarwan Ali
arXiv:2404. 02141v5 Announce Type: replace-cross Abstract: In both observational data and randomized control trials, researchers select statistical models to articulate how the outcome of interest varies with combinations of observable covariates.
By Aparajithan Venkateswaran, Anirudh Sankar, Arun G. Chandrasekhar, Tyler H. McCormick