arXiv:2608. 11269v1 Announce Type: cross Abstract: Omics datasets, particularly single-cell RNA sequencing data, are high-dimensional, sparse, noisy, and dominated by zero values, making faithful low-dimensional representation challenging.
By Fenosoa Randrianjatovo, Maya Saleh, Simon Girard, Amadou Barry
arXiv:2509. 03373v2 Announce Type: replace Abstract: Dimensionality reduction methods such as t-SNE and UMAP are popular methods for visualizing data with a potential (latent) clustered structure.
By Elizabeth Coda, Ery Arias-Castro, Gal Mishne
arXiv:2606. 00370v1 Announce Type: cross Abstract: Diverse genomics data, scientific questions, and analysis tasks typically demand highly specialized visualizations.
By Astrid van den Brandt, Kiroong Choe, Sehi L'Yi, Devin Lange, Nils Gehlenborg
arXiv:2605. 23540v2 Announce Type: replace Abstract: Dimensionality Reduction (DR) methods are widely used to visualize high-dimensional data.
By Diede P. M. van der Hoorn, Alessio Arleo, Fernando V. Paulovich
arXiv:2607. 14410v1 Announce Type: new Abstract: Spatially resolved omics studies increasingly combine transcriptomic and epigenomic assays, yet downstream analysis is often still performed using single-modality pipelines.
By Jagan Mohan Reddy Dwarampudi, Veena Kochat, Suresh Satpati, Kunal Rai, Tania Banerjee
arXiv:2606. 08258v1 Announce Type: cross Abstract: Understanding and comparing structures in scalar fields is a central challenge in scientific visualization, with applications ranging from feature analysis to temporal and structural comparison.
By Guangyu Meng, Mingzhe Li, Erin Wolf Chambers