arXiv:2607. 19406v1 Announce Type: new Abstract: Structural elucidation from Nuclear Magnetic Resonance (NMR) data remains a fundamental bottleneck across chemistry, materials science, and biology.
By Irina Espejo Morales, Damon Hinz, Marvin Alberts, Geraud Krawezik, Haewon Jeong, Shirley Ho
arXiv:2608.30910v1 Announce Type: new
Abstract: Spectroscopic structure elucidation is central to molecular analysis, but recent Large Language Model (LLM)-based methods mostly formulate it as direct...
By Xuanle Zhao, Xinyuan Cai, Xiang Cheng, Bo Xu
arXiv:2608. 14720v1 Announce Type: cross Abstract: Following the molecular discovery and synthesis revolutions, scalable automated structure elucidation from routine spectroscopic data remains an outstanding challenge.
By Bingsen Xue, Zhuojun Jiang, Jianhao Zhang, Mingcheng Gu, Yizhe Yuan, Yongtai Zhuo, Yifan Zhang, Li Wang, Ya Su, Yue Yuan, Jiang Liu, Xueqian Kong, Cheng Jin
arXiv:2512. 19733v3 Announce Type: replace-cross Abstract: Molecular structure elucidation from spectroscopic data is a long-standing challenge in Chemistry, traditionally requiring expert interpretation.
By Federico Ottomano, Yingzhen Li, Alex M. Ganose
The paper introduces a semi‑supervised framework that learns to predict nuclear magnetic resonance (NMR) chemical shifts from millions of literature‑extracted spectra without explicit atom‑level assignments. By treating the prediction as a permutation‑invariant set supervision problem, the authors show that optimal bipartite matching can be reduced to a sorting‑based loss, enabling stable large‑scale training. The resulting models outperform state‑of‑the‑art methods, generalize better to diverse molecules, and for the first time capture systematic solvent effects across common NMR solvents.
By Yongqi Jin, Yecheng Wang, Jun-jie Wang, Rong Zhu, Guolin Ke, Weinan E
arXiv:2512. 18531v2 Announce Type: replace-cross Abstract: One-dimensional NMR spectroscopy is one of the most widely used techniques for the characterization of organic compounds and natural products.
By Frank Hu, Jonathan M. Tubb, Dimitris Argyropoulos, Sergey Golotvin, Mikhail Elyashberg, Grant M. Rotskoff, Matthew W. Kanan, Thomas E. Markland
arXiv:2607. 19816v1 Announce Type: cross Abstract: Determining molecular structures from spectroscopic data remains fundamentally challenging because the inverse problem is intrinsically underdetermined: individual spectra are sparse, low-dimensional, and encode only partial structural evidence relative to the vast space of possible molecules.
By Chengchun Liu, Zhiyuan Yan, Li Yuan, Hao Li, Boxuan Zhao, Yonghong Tian, Bartosz A. Grzybowski, Fanyang Mo
Nuclear Magnetic Resonance (NMR) spectroscopy is the gold standard for molecular structure elucidation, yet interpreting complex spectra for unknown molecules remains a bottleneck reliant on human expertise. While artificial intelligence has advanced this field, current methods face a critical trade-off: database retrieval cannot identify novel scaffolds, while de novo molecular structure elucidation models operate as black boxes, lacking the atom-level interpretability required for rigorous scientific validation.
arXiv:2606. 29776v1 Announce Type: cross Abstract: Nuclear Magnetic Resonance (NMR) spectroscopy is the gold standard for molecular structure elucidation, yet interpreting complex spectra for unknown molecules remains a bottleneck reliant on human expertise.
By Zheng Fang, Chen Yang, Yusen Tan, Yunpeng Zhao, Fanjie Xu, Hongxin Xiang, Hanyu Sun, Hanyu Gao, Xiaojian Wang, Wenjie Du, Yuqiang Li, Jun Xia
The paper introduces a multitask large reasoning model for molecular science that incorporates chemical knowledge via a multispecialist architecture, chain-of-thought supervision, and molecule-informed reinforcement learning. It coordinates prediction and inference specialists across ten molecular tasks—including description, generation, nomenclature translation, property prediction, and reaction prediction—using task-conditioned routing. The model surpasses more than 20 general-purpose and molecular large language models, improving aggregate performance by 50.3% and outperforming leading multitask baselines on most tasks, while maintaining interpretable chemical inference and demonstrating a workflow for CNS candidate generation and retrosynthetic planning.
By Pengfei Liu, Shuang Ge, Xiaobo Wang, Xin Liu, Jun Tao, Yan Li, Chao Liu, Ling Chen, Zhixiang Ren
arXiv:2608.23104v1 Announce Type: cross
Abstract: Molecular science represents an important frontier for LLM-based agents. Unlike general agents that mainly operate over natural language, code, or we...
By Jiatong Li, Wengyu Zhang, Weida Wang, Yuxuan Ren, Wei Liu, Chenyang Mao, Yuqiang Li, Yatao Bian, Changmeng Zheng, Xiaoyong Wei, Qing Li
AutoREC is an open‑source Python platform that uses reinforcement learning to automatically generate equivalent circuit models (ECMs) from electrochemical impedance spectroscopy (EIS) data. The platform frames ECM generation as a Markov decision process, training a Double Deep Q‑Network agent that iteratively modifies circuit topologies based on state, actions, and model feedback. It supports end‑to‑end workflows—including EIS preprocessing, agent training, ECM generation, and visualization—and has been demonstrated on synthetic datasets and real experimental spectra from batteries, corrosion, oxygen evolution, and CO₂ reduction systems.
By Ali Jaberi (Clean Energy Innovation Research Centre, National Research Council Canada, Mississauga, ON, Canada), Yonatan Kurniawan (Department of Materials Science and Engineering, University of Toronto, Toronto, ON, Canada), Robert Black (Clean Energy Innovation Research Centre, National Research Council Canada, Mississauga, ON, Canada), Shayan Mousavi M. (Clean Energy Innovation Research Centre, National Research Council Canada, Mississauga, ON, Canada), Kabir Verma (Cheriton School of Computer Science, University of Waterloo, Waterloo, ON, Canada), Zoya Sadighi (Clean Energy Innovation Research Centre, National Research Council Canada, Mississauga, ON, Canada), Santiago Miret (Lila Sciences, San Francisco, CA, USA), Jason Hattrick-Simpers (Department of Materials Science and Engineering, University of Toronto, Toronto, ON, Canada)