Diffusion models represent a leading paradigm for graph generation, with notable impact in domains such as molecular design. Yet, scaling these models to large graphs remains an open problem.
arXiv:2607. 07232v1 Announce Type: cross Abstract: Diffusion models represent a leading paradigm for graph generation, with notable impact in domains such as molecular design.
By Sergio Rozada, Yiming Qin, Manuel Madeira, Pascal Frossard, Alejandro Ribeiro
arXiv:2606. 06272v1 Announce Type: new Abstract: Generative Flow Networks (GFlowNets) are a framework for sampling structured objects via stochastic trajectories in a directed graph.
By Ian Maksimov, Nikita Morozov, Denis Belomestny, Sergey Samsonov
arXiv:2607. 06497v1 Announce Type: new Abstract: We introduce EntroPath, a manifold learning method that recovers geodesic geometry from data graphs through ensembles of diffusion paths.
By Przemys{\l}aw Rola
arXiv:2606. 14334v1 Announce Type: new Abstract: High-dimensional datasets often concentrate near low-dimensional structures, but estimating their geometry from samples typically relies on graphs and kernels that scale poorly with dataset size and dimension.
By Jacob Bamberger, Adam Gosztolai, Pierre Vandergheynst, Michael Bronstein, Iolo Jones
arXiv:2602.15239v3 Announce Type: replace
Abstract: Transformers have achieved remarkable success across domains, motivating the rise of Graph Transformers (GTs) as attention-based architectures for...
By Javier Porras-Valenzuela, Zhiyang Wang, Teresa Shang, Yusu Wang, Alejandro Ribeiro
arXiv:2609.25659v1 Announce Type: new
Abstract: Many scientific datasets, such as molecular conformational ensembles or single-cell tissue measurements, are naturally modeled as meta-distributions: d...
By Doron Haviv, Edward De Brouwer, Rishabh Anand, Rex Ying, A\"icha Bentaieb, Gabriele Scalia, Hector Corrada Bravo
arXiv:2602.19600v2 Announce Type: replace
Abstract: Many high-dimensional datasets concentrate near a low-dimensional structure embedded in the ambient space. Generative models for such data must con...
By Xinyu Tian, Xiaotong Shen
arXiv:2608. 00270v2 Announce Type: replace Abstract: Neural Combinatorial Optimization (NCO) techniques have emerged as a highly efficient alternative to traditional exact algorithms for solving routing problems such as the Traveling Salesman Problem (TSP).
By David Aguado, Daniel Fuertes, Carlos R. del-Blanco, Fernando Jaureguizar
arXiv:2606. 03270v1 Announce Type: cross Abstract: Foundation models have sparked a revolution via a pretraining-adaptation paradigm, with recent efforts extending this success to graphs.
By Li Sun, Zhenhao Huang, Yiding Wang, Qin Chen, Pietro Lio, Philip S. Yu
arXiv:2609.15072v1 Announce Type: cross
Abstract: Methods of Branched Optimal Transport (BOT) mimic the economy and efficiency of natural tree-like structures, such as those found in rivers and biolo...
By Semyon Semenov, Viktor Kovalchuk, Meir Roketlishvili, Albert Baichorov, Fakhri Karray, Martin Takac, Arip Asadulaev
RW-Flow presents a new one‑step generative framework for data on compact manifolds, leveraging Wasserstein gradient flows. The authors derive a necessary and sufficient identifiability condition for velocity fields on compact, connected Riemannian manifolds, showing that a symmetric, Lipschitz‑continuous cost function yields identifiability iff its Gibbs kernel is nondegenerate. Experiments on geospatial events, protein and RNA torsion angles, and discretized manifolds demonstrate that RW‑Flow surpasses existing one‑step methods across most benchmark settings.
By Ualibyek Nurgulan, Seungwoo Yoo, Prin Phunyaphibarn, Minhyuk Sung