arXiv:2607. 18332v1 Announce Type: cross Abstract: Accurate prediction of ADMET (Absorption, Distribution, Metabolism, Excretion, and Toxicity) is important for drug discovery.
By Hexiao Ding, Hongzhao Chen, Jing Lan, Yufeng Jiang, Zihong Luo, Zehua Xiong, Tianlong Ruan, Yunlin Mao, Nga Chun Ng, Gwing Kei Yip, Gerald W. Y. Cheng, Kate Inyoung Oh, Jing Cai, Liang-Ting Lin, Jung Sun Yoo
The paper investigates how small entry‑wise errors in machine‑learned Kohn‑Sham Hamiltonians can still lead to inaccurate eigenvalues and eigenvectors. It shows that existing physics‑informed losses only partially capture the error, and proposes using the cumulative local density of states (cumulative LDOS) as a complete training signal that uniquely determines the Hamiltonian. Fine‑tuning three Hamiltonian networks with this loss, called FermiScope, reduces HOMO‑LUMO gap errors without increasing element‑wise error, and the improvement generalizes to out‑of‑distribution and molecular‑dynamics scenarios.
By Fang Sun, Hekai Cheng, Ruoyan Li, Yuanzhou Chen, Wei Wang, Jason Cong, Yizhou Sun
arXiv:2507. 03853v2 Announce Type: replace Abstract: We introduce OrbitAll, a geometry- and physics-informed deep learning framework that encodes any molecular system with arbitrary charges, spins, and environmental effects using electronic structure information.
By Beom Seok Kang, Vignesh C. Bhethanabotla, Amin Tavakoli, Maurice D. Hanisch, Arimitsu Horikawa-Strakovsky, Miguel Nouman, Danish Khan, William A. Goddard III, Anima Anandkumar
arXiv:2606. 10349v1 Announce Type: cross Abstract: We present a magnetic extension of the Hierarchically Interacting Particle Neural Network (HIP-NN) that enables large-scale simulations of electron-mediated spin dynamics in disordered itinerant magnets.
By Supriyo Ghosh, Yunhao Fan, Sheng Zhang, Kipton Barros, Gia-Wei Chern
arXiv:2509. 21624v3 Announce Type: replace Abstract: Fundamental tasks in computational chemistry, from transition state search to vibrational analysis, rely on molecular Hessians, which are the second derivatives of the potential energy.
By Andreas Burger, Luca Thiede, Nikolaj R{\o}nne, Varinia Bernales, Nandita Vijaykumar, Tejs Vegge, Arghya Bhowmik, Alan Aspuru-Guzik
arXiv:2509.21624v4 Announce Type: replace
Abstract: Molecular Hessians, the second derivatives of the potential energy, are fundamental to many workflows in computational chemistry. Usually, accurate...
By Andreas Burger, Luca Thiede, Nikolaj R{\o}nne, Varinia Bernales, Nandita Vijaykumar, Tejs Vegge, Arghya Bhowmik, Alan Aspuru-Guzik
arXiv:2610.18924v1 Announce Type: cross
Abstract: Interpreting electron paramagnetic resonance (EPR) spectra commonly requires repeated forward simulation and optimization of spin Hamiltonian paramet...
By Alec H. Follmer
arXiv:2606. 30961v1 Announce Type: cross Abstract: Advances in deep learning architectures and representations have enabled ML-driven chemical property prediction, but state-of-the-art (SOTA) models have remained largely confined to independent codebases and lack support for diverse chemical species.
By Jacob W. Toney, Samir Darouich, Yiran Wang, Aaron G. Garrison, Johannes K\"astner, Heather J. Kulik
arXiv:2607. 19816v1 Announce Type: cross Abstract: Determining molecular structures from spectroscopic data remains fundamentally challenging because the inverse problem is intrinsically underdetermined: individual spectra are sparse, low-dimensional, and encode only partial structural evidence relative to the vast space of possible molecules.
By Chengchun Liu, Zhiyuan Yan, Li Yuan, Hao Li, Boxuan Zhao, Yonghong Tian, Bartosz A. Grzybowski, Fanyang Mo
arXiv:2607. 28537v1 Announce Type: cross Abstract: Metallic magnets exhibit complex spin dynamics governed by electronically generated interactions.
By Ali Rayat, Yunhao Fan, Gia-Wei Chern
The paper presents a multitask learning approach that incorporates orbitally resolved semiempirical charges into machine learning interatomic potentials (MLIPs). By training with inexpensive GFN1‑xTB orbital charges, the model reduces energy mean absolute error by 58% compared to energy‑only baselines and needs five times less data to achieve similar performance. The method also outperforms or matches models using costly DFT charges and preserves inference efficiency, offering a scalable way to build accurate, data‑efficient foundation models for complex chemical systems.
By Ihor Neporozhnii, Sjoerd Hoogland, Oleksandr Voznyy
arXiv:2606. 18691v1 Announce Type: new Abstract: Pre-trained materials foundation models, or machine learning interatomic potentials, leverage general physicochemical knowledge to effectively approximate potential energy surfaces.
By Youngwoo Cho, Seunghoon Yi, Wooil Yang, Sungmo Kang, Young-woo Son, Jaegul Choo, Joonseok Lee, Soo Kyung Kim, Hongkee Yoon