arXiv AI

Adaptive Post-Processing Drives Instance-Level Detection in Stroke Lesion Segmentation

arXiv:2608. 16377v1 Announce Type: cross Abstract: Instance-level lesion detection has been an increasingly larger focal point in medical image segmentation besides the more standard voxel-level overlap.

arXiv Computer Vision
Sep 11

Pre- and Post-Treatment Brain Metastases Segmentation Using nnU-Net with Post-Processing for BraTS 2026

The paper presents a segmentation pipeline for brain metastases in both pre‑ and post‑treatment cases using a 5‑fold nnU‑Net ResEnc‑L ensemble trained on 1,296 four‑modality cases. A rule‑based post‑processing cascade improves the lesion‑wise Dice similarity coefficient (LW‑DSC) for enhancing tumour, tumour core, whole tumour, and resection cavity sub‑regions, achieving LW‑DSC scores of 0.733, 0.751, 0.713, and 0.549 respectively on the official validation leaderboard. The authors conduct a five‑fold out‑of‑fold analysis to validate the robustness of each post‑processing stage, provide a mechanistic explanation of LW‑DSC behaviour, and report thirteen negative results that challenge common intuitions, with all code released under Apache‑2.0.

By Haobin Liu, Xin Wang
Hugging Face Trending Papers
Sep 10

Pre- and Post-Treatment Brain Metastases Segmentation Using nnU-Net with Post-Processing for BraTS 2026

The paper presents a pragmatic segmentation pipeline for brain metastases in the BraTS 2026 Task 1, using a 5‑fold nnU-Net ResEnc‑L ensemble trained for 1,000 epochs on 1,296 four‑modality cases. A rule‑based post‑processing cascade tuned for the lesion‑wise Dice similarity coefficient (LW‑DSC) improves performance, achieving LW‑DSC scores of 0.733, 0.751, 0.713, and 0.549 on enhancing tumour, tumour core, whole tumour, and resection cavity, respectively. The authors audit each post‑processing stage with a five‑fold out‑of‑fold analysis, confirm two stages as robust, and provide a mechanistic analysis of LW‑DSC, along with thirteen negative results that challenge common intuitions.

arXiv Computer Vision
Sep 25

BiCC: Bidirectional Connected-Component Loss for Instance-Aware Segmentation

The paper introduces BiCC, a bidirectional connected-component loss that pairs annotation- and prediction-derived partitions to score predicted components on their own scale. By deriving instances from predictions, BiCC directly penalizes false-positive components regardless of size, allowing a balance parameter to control the lesion-wise precision–recall trade-off. Across five datasets, BiCC outperforms existing instance-aware losses such as CC-DiceCE and blob loss in lesion-wise F1, and improves over DiceCE on multiple datasets.

By Luc Bouteille, Frederic Jonske, Jens Kleesiek, Alexander Jaus
arXiv AI
Jun 30

BTI-Net: Bidirectional Decoder-Level Task Interaction via Uncertainty-Aware Gating for Multi-Task Medical Image Analysis

arXiv:2606. 29102v1 Announce Type: cross Abstract: Jointly learning to segment and classify medical images demands cross-task synergy, yet encoder-sharing architectures limit decoder reconstruction to task-private representations, permanently discarding the boundary cues and semantic priors each branch could supply to the other.

By Abdullah Al Shafi, Md Kawsar Mahmud Khan Zunayed, Safin Ahmmed, Sk Imran Hossain, Engelbert Mephu Nguifo