arXiv:2607. 20194v1 Announce Type: new Abstract: The development of organic light-emitting diode (OLED) materials faces the compounded challenges of an astronomically large chemical space, stringent quantum-chemical constraints, and a scarcity of labeled data.
By Fukang Wen, Yuchong Tang, Jingyuan Li, Beichen Wang, Yixuan Jiang, Xiaoyi Jiang, Yaxuan Liu, Shunyu Wang, Zuoqiang Shi, Yi Zhu, Yanan Zhu, Pipi Hu
arXiv:2606. 08221v1 Announce Type: new Abstract: Designing OLED molecules with targeted optical properties remains challenging due to the scarcity of high-quality data and the limited reliability of conditional control in generative models across chemical motifs.
By Haozhe Huang, Manuel Gonzalez Lastre, Hyun Suk Park, Jorge A. Campos-Gonzalez-Angulo, Xinjian Liu, Al\'an Aspuru-Guzik
arXiv:2607. 19044v1 Announce Type: new Abstract: Leveraging large language models (LLMs) for molecular generation has shown remarkable potential in chemical and drug design.
By Mingxuan Ouyang, Hao Lan, Wanyu Lin
arXiv:2606. 09520v1 Announce Type: cross Abstract: Can a general-purpose large language model design molecules with the precision of a seasoned chemist?
By Junyi Gong, Zijie Qiu, Ben Zhong Tang
BOOM is a new benchmark for evaluating out‑of‑distribution (OOD) molecular property predictions in machine learning. It provides chemically‑informed tests across common property prediction tasks and assesses over 150 model‑task combinations. The study shows that current models, including chemical foundation models, struggle to generalize OOD, with the best model still exhibiting three times higher error than in‑distribution predictions.
By Evan R. Antoniuk, Shehtab Zaman, Tal Ben-Nun, Peggy Li, James Diffenderfer, Busra Sahin, Obadiah Smolenski, Everett Grethel, Tim Hsu, Anna M. Hiszpanski, Kenneth Chiu, Bhavya Kailkhura, Brian Van Essen
arXiv:2606. 03057v1 Announce Type: cross Abstract: Large language models (LLMs) are increasingly used for molecular tasks, but it remains unclear which molecular representation to use.
By Arun Raja, Garrett M. Morris, Kian Ming A. Chai
The study evaluates four pretrained molecular language models on six virtual libraries covering drug discovery, organic materials, and catalysis. It finds that native embeddings vary widely in performance, while molecular fingerprints remain consistently strong. Fine‑tuning the models on library‑specific data markedly improves sample efficiency, with several adapted encoders outperforming others across all tasks.
By Henrik Wille, Luis-Finley Sch\"utz, Felix Strieth-Kalthoff
oMeBench is a large-scale, expert-curated benchmark designed to evaluate large language models (LLMs) on organic mechanism reasoning. It contains over 10,000 annotated mechanistic steps, including reaction type labels, intermediate structures, and difficulty ratings, and introduces the oMeS scoring framework to assess logical consistency and chemical structural similarity. Evaluation shows that while current LLMs display promising chemical intuition, they often fail to produce correct and consistent multi-step reasoning, though prompting and fine-tuning can bring smaller models up to the level of closed‑source frontier models.
By Ruiling Xu, Yifan Zhang
The paper explores how large language models (LLMs) can be trained for small-molecule drug design by using synthetic tasks that are cheaper to evaluate. By employing a curriculum that gradually increases task difficulty, the authors demonstrate that LLMs can learn design strategies that outperform larger models on structure-based lead optimization. This approach shows that scaling post‑training with synthetic tasks can effectively adapt LLMs to high‑cost experimental scenarios that are otherwise infeasible to train on directly.
By Frank Hu, Shriram Chennakesavalu, Zichen Wang, Patricia Suriana, Bodhi Vani, Kirill Shmilovich, Kangway Chuang, Colin Grambow
The review examines how Large Language Models (LLMs) enhance nanophotonics design by providing semantic interfaces, code generation, and tool orchestration. It traces the evolution from classical neural networks to transformer-based models and categorizes LLM applications into surrogate models that map structure to spectrum and agentic systems that generate code and orchestrate simulations for closed-loop optimization. The article also highlights potential cross-disciplinary uses of LLMs in materials science and wireless communications, and envisions future multimodal foundation models that actively collaborate in autonomous scientific discovery.
By Huanshu Zhang, Kegeng Tang, Lei Kang, Sawyer D. Campbell, Zihao Wang, Douglas H. Werner
arXiv:2607. 03007v1 Announce Type: cross Abstract: Recent advances in molecular large language models have led to strong performance on molecular understanding and generation tasks, yet these gains often come without reliable structural grounding.
By Wenda Wang, Jinjia Feng, Zhewei Wei
arXiv:2605. 15354v2 Announce Type: replace Abstract: Despite the success of foundation models in language and vision, molecular graph generation still lacks a unified framework for heterogeneous design tasks with reliable controllability.
By Yihan Zhu, Yuhan Liu, Weijiang Li, Tengfei Luo, Meng Jiang