arXiv Machine Learning

CrystalMO-TuRBO: Multi-Objective Trust-Region Bayesian Optimization for High-precision Joint Crystal Structure Refinement

CrystalMO‑TuRBO is a multi‑objective trust‑region Bayesian optimization framework designed for joint crystal structure refinement using X‑ray and neutron diffraction data. It treats the discrepancies from each modality as separate objectives, first exploring the parameter space globally with parallel Bayesian optimization across multiple scalarizations, then refining locally within a shrinking trust region to achieve high‑precision solutions. Experiments on single‑crystal Ho₂Ti₂O₇ data show that this two‑phase approach improves convergence, robustness, and parameter precision over traditional least‑squares, likelihood‑based, and single‑objective Bayesian methods.

arXiv AI
1d ago

XDecomposer: Learning Prior-Free Set Decomposition for Multiphase X-ray Diffraction

XDecomposer is a prior‑free framework that jointly decomposes and identifies multiphase X‑ray diffraction patterns without requiring candidate phase lists, structural templates, or knowledge of the number of phases. It treats multiphase analysis as a set prediction problem, inferring an unordered set of phase‑resolved components, their mixture proportions, and structural representations within a single architecture. Experiments on simulated and experimental data demonstrate improved reconstruction accuracy and phase identification across diverse chemical systems, with strong generalization to unseen mixtures.

By Hanyu Gao, Bin Cao, Yunyue Su, Tong-Yi Zhang, Qiang Liu
arXiv Machine Learning
Sep 3

Scalable Bayesian Optimization of Composite Functions for Image-Based Inverse Problems in Materials Characterization

The paper introduces Scalable Bayesian Optimization of Composite Functions (SBOCF) for efficiently estimating physical parameters from scientific images, specifically targeting electron microscopy PACBED patterns. SBOCF leverages the composite structure of the image-matching objective, reducing modeled outputs from 24,649 to 11 by using patch-level summaries and correction terms. With only 50 simulator evaluations, SBOCF outperformed standard Bayesian optimization, achieving up to 290× lower median SSE on synthetic SrTiO3 benchmarks and producing accurate parameter estimates on experimental data without task-specific pretraining.

By Dasol Yoon, Poompol Buathong, Chia-Hao Lee, Yujia Zhang, David A. Muller, Peter I. Frazier
arXiv Machine Learning
6d ago

Riemannian Flow Models with Reinforcement Learning for Molecular Crystal Structure Prediction

The paper introduces CG-OMatG, an equivariant Riemannian flow-based generative model that predicts molecular crystal structures using a coarse-grained, hierarchical representation. It treats molecules as rigid bodies, performs inter- and intra-molecular message passing, and learns to reconstruct molecule centroids, orientations, and lattice parameters conditioned on chemical species and conformer geometry. The model is trained on OMC25 and CSD datasets, fine-tuned with policy gradient reinforcement learning to favor low-energy structures, and validated against a CSP blind test benchmark using COMPACK packing-similarity analysis.

By Thomas Egg, Harry Winston Sullivan, Maya M. Martirossyan, Philipp H\"ollmer, Cheng Zeng, Adrian Roitberg, Mingjie Liu, Richard Hennig, Sapna Sarupria, Ellad B. Tadmor, Stefano Martiniani
arXiv Machine Learning
Jun 2

Towards Automated Discovery: A Review of Generative Models, Multimodal Learning and Closed-Loop Workflows in Inverse Materials Design

arXiv:2606. 02507v1 Announce Type: cross Abstract: Inverse materials design is shifting materials discovery from forward prediction to targeted proposal of candidates that satisfy objectives under physical constraints.

By Anand Babu, Rog\'erio Almeida Gouv\^ea, Gian-Marco Rignanese
Hugging Face Trending Papers
Jul 8

Bayesian Optimization of Genetic Algorithm Hyperparameters in a Multi-Fidelity Framework for Efficient Lattice Material Design

This study presents a multi-fidelity framework for the systematic optimization of genetic algorithm (GA) hyperparameters. The framework integrates three fidelity levels: high-fidelity Fast Fourier Transform (FFT) homogenization for validation, a medium-fidelity 3D convolutional neural network surrogate for rapid property evaluation, and a low-fidelity Gaussian process (GP) surrogate within a Bayesian optimization (BO) framework to guide the hyperparameter search.

arXiv Machine Learning
Aug 6

Active Learning Guided Design Space Refinement for Scalable Multi-Objective Bayesian Optimization in Materials Discovery

arXiv:2608. 04651v1 Announce Type: new Abstract: Advanced materials discovery increasingly relies on machine learning and Bayesian optimization to explore large discrete design spaces under limited evaluation budgets.

By Alexandros Ntagiantas, Panagiotis Tsilimidos, George Giannakopoulos, Christoforos Rekatsinas, Panagiotis Krokidas
arXiv Machine Learning
5d ago

EP-Flow: Disordered Crystal Structure Prediction without Site-Level Annotations

EP-Flow introduces a new framework for predicting disordered crystal structures without requiring site-level disorder annotations. It uses an Occupancy Distribution Matrix (ODM) to represent continuous site-by-species occupancies and enforces constraints through a transportation polytope. The method jointly generates occupancies, fractional coordinates, and lattice parameters, achieving state‑of‑the‑art performance on formula‑conditioned disordered CSP benchmarks and recovering chemically meaningful local disorder patterns.

By Qiuliang Liu, Liming Wu, Qi Li, Zhonglong Peng, Chang Chen, Xiaolong Chen, Wenbing Huang, Shifeng Jin
arXiv Machine Learning
Jul 7

FastCSP: Accelerated Molecular Crystal Structure Prediction with Universal Model for Atoms

arXiv:2508. 02641v2 Announce Type: replace-cross Abstract: Molecular crystal structure prediction (CSP) is essential for applications in pharmaceuticals and organic electronics.

By Vahe Gharakhanyan, Yi Yang, Luis Barroso-Luque, Daniel S. Levine, Sushree Jagriti Sahoo, Brandon M. Wood, Kyle Michel, Muhammed Shuaibi, Gregory J. O. Beran, Viachaslau Bernat, Misko Dzamba, Xiang Fu, Meng Gao, Xingyu Liu, Benjamin K. Miller, Keian Noori, Lafe J. Purvis, Tingling Rao, Ammar Rizvi, Matt Uyttendaele, Andrew J. Ouderkirk, Chiara Daraio, C. Lawrence Zitnick, Arman Boromand, Noa Marom, Zachary W. Ulissi, Anuroop Sriram