arXiv Machine Learning

NucleoNet: A Nuclear-Aware Determinant Ansatz for Multi-Geometry Neural Variational Monte Carlo

NucleoNet is a neural‑network variational Monte Carlo ansatz that treats electrons and nuclei as a unified particle set, allowing a single model to be optimized across multiple geometries. The approach uses a shared electron–nucleus backbone to evolve one‑particle and two‑particle representations, with nuclear streams learning representations that condition orbital construction while antisymmetry is enforced only by electronic determinants. On small‑molecule benchmarks, NucleoNet matches the accuracy of established neural‑wavefunction baselines with far fewer parameters and successfully describes dissociation curves and minimum‑energy paths for several systems, demonstrating that a compact wavefunction can capture molecular geometries with a single set of parameters.

arXiv Machine Learning
Oct 19

Multitask learning with semiempirical orbital charges enables sample-efficient MLIPs

The paper presents a multitask learning approach that incorporates orbitally resolved semiempirical charges into machine learning interatomic potentials (MLIPs). By training with inexpensive GFN1‑xTB orbital charges, the model reduces energy mean absolute error by 58% compared to energy‑only baselines and needs five times less data to achieve similar performance. The method also outperforms or matches models using costly DFT charges and preserves inference efficiency, offering a scalable way to build accurate, data‑efficient foundation models for complex chemical systems.

By Ihor Neporozhnii, Sjoerd Hoogland, Oleksandr Voznyy
arXiv AI
Sep 17

Learning Nuclear Structure with AI: Radii and Collectivity

The paper presents NuCLR, a multi-task neural network that learns nuclear data representations to predict charge radii and electric‑quadrupole transition strengths across hundreds of nuclides. Using held‑out ensembles, the model achieves a charge‑radius RMS deviation of 0.0147 fm and a B(E2) RMS deviation of 0.192 e²b², comparable to leading nuclear models. The authors provide error bars indicating where additional experimental data could improve predictions, positioning NuCLR as a data‑driven surveyor of nuclear structure.

By Giuliano Giacalone, Sokratis Trifinopoulos, Mike Williams
arXiv Machine Learning
Oct 9

NEMORA: Neural Equivariant Multipole Operators for Long-Range Atomistic Learning

The paper introduces NEMORA, a neural equivariant extension of the Fast Multipole Method designed to capture long‑range tensorial interactions in atomistic machine learning models. NEMORA replaces the FMM’s fixed multipole expansion with learnable equivariant operators that operate on an adaptive spatial hierarchy, enabling many‑body interactions across multiple length scales while preserving physical inductive biases. The method achieves linear time and memory complexity, allowing it to handle systems with hundreds of thousands of atoms and significantly reducing force and energy errors on non‑local benchmarks compared to short‑range backbones.

By Jay L. Kaplan, Samuel Varner, Rebecca Willett, Juan J. de Pablo
arXiv AI
Aug 17

Reaction-Transformation-Aware Flow Matching for Generalizable Transition State Generation

arXiv:2608. 14076v1 Announce Type: cross Abstract: Transition-state (TS) structures define the energetic barriers and mechanistic pathways of elementary chemical reactions, yet their identification remains computationally demanding because conventional saddle-point searches require expensive quantum-mechanical calculations.

By Kaipeng Zeng, Wenxi Zhai, Shengrui Xu, Jie Zhao, Bowen Li, Shiyue Wang, Junchi Yan, Tong Zhu
arXiv Statistics ML
Sep 14

An ab initio foundation model of wavefunctions that accurately describes chemical bond breaking

The paper introduces Orbformer, a transferable wavefunction model that uses deep neural networks to pretrain on 22,000 equilibrium and dissociating molecular structures. Fine‑tuning Orbformer on unseen molecules achieves an accuracy‑cost ratio comparable to classical multireference methods, consistently reaching chemical accuracy (1 kcal/mol) on standard benchmarks, challenging bond dissociations, and Diels‑Alder reactions. This demonstrates that amortizing the cost of solving the Schrödinger equation across many molecules is feasible in quantum chemistry.

By Adam Foster, Zeno Sch\"atzle, P. Bern\'at Szab\'o, Lixue Cheng, Jonas K\"ohler, Gino Cassella, Nicholas Gao, Jiawei Li, Frank No\'e, Jan Hermann
arXiv Machine Learning
Jul 8

Multimodal Molecular Representation Learning with Graph Neural Networks, Deep & Cross Networks, and SMILES Embeddings

arXiv:2607. 05736v1 Announce Type: new Abstract: Molecular property prediction often relies on isolated data modalities, where continuous 3D graph neural networks (GNNs) struggle to efficiently capture long-range topological dependencies and exact macroscopic heuristics.

By Qiwei Han, Chi Zhou, Ruobing Wang, Zheng Ma
arXiv Machine Learning
Sep 29

Scaling Density Functional Theory with Gaussian Splatting

The paper introduces Gaussian Splatting for Density Functional Theory (GS‑DFT), a method that represents molecular orbitals as a cloud of Gaussians optimized via gradient descent. GS‑DFT replaces fixed atom‑centered basis sets with an adaptive, differentiable orthogonalization and efficient two‑electron integral evaluation, achieving accuracy comparable to large conventional bases with far fewer parameters. The solver scales quadratically with cloud size, enabling simulations of up to 2,742 atoms on a single four‑GPU node at triple‑zeta precision.

By Andr\'es Guzm\'an-Cordero, Cindy Zhang, Majdi Hassan, Marta Skreta, Kirill Neklyudov, Matija Medvidovi\'c
arXiv Machine Learning
Jul 23

OrbitAll: A Unified Quantum Mechanical Representation Deep Learning Framework for All Molecular Systems

arXiv:2507. 03853v2 Announce Type: replace Abstract: We introduce OrbitAll, a geometry- and physics-informed deep learning framework that encodes any molecular system with arbitrary charges, spins, and environmental effects using electronic structure information.

By Beom Seok Kang, Vignesh C. Bhethanabotla, Amin Tavakoli, Maurice D. Hanisch, Arimitsu Horikawa-Strakovsky, Miguel Nouman, Danish Khan, William A. Goddard III, Anima Anandkumar