arXiv:2606. 10543v1 Announce Type: cross Abstract: Designing functional biological sequences requires navigating vast discrete spaces under strict evolutionary and biophysical constraints.
Summary generated by The Flow from the publisher's feed. The full article lives at arXiv AI.
arXiv:2606. 07400v1 Announce Type: new Abstract: Many scientific problems require inferring unobserved mechanistic latent states from indirect observations.
arXiv:2606. 07760v1 Announce Type: new Abstract: Understanding cellular phenotypes and how they respond to perturbations is critical for disease biology and therapeutic design.
arXiv:2605. 00182v3 Announce Type: replace Abstract: Proteins are shaped by gradual evolution under biophysical and functional constraints.
arXiv:2606. 02133v1 Announce Type: cross Abstract: Non-monotonic sequence generation methods, such as masked diffusion models, provide a flexible alternative to left-to-right autoregressive modeling by allowing tokens to be generated in non-fixed and prescribed orders.
arXiv:2607. 09039v1 Announce Type: new Abstract: The ability to generate variable-length proteins is crucial in protein design, where the optimal length is often unknown and tightly coupled to designability.
arXiv:2602. 18695v2 Announce Type: replace Abstract: Existing insertion-based masked diffusion models that generate sequences by interleaving token insertion with unmasking use fixed schedules that are not dependent on the data.