arXiv AI

Is Self-Pretraining really useful to improve diagnosis in medical Time Series?

arXiv:2608. 06122v1 Announce Type: cross Abstract: Inspired by recent evidence that transformer architectures benefit from Self-PreTraining (SPT) on long-context benchmarks, we investigate whether similar gains extend to multimodal, multivariate, and even simple univariate medical time series.

arXiv Computer Vision
Sep 22

Enabling Vision and Cross-Modal Learning for Multimodal Stroke Recurrence Prediction: An Interpretable Two-Step Framework

arXiv:2609.22271v1 Announce Type: new Abstract: Multimodal stroke recurrence prediction requires effective integration of heterogeneous clinical and imaging data, yet modality imbalance often causes...

By Christian Gapp, Elias Tappeiner, Martin Welk, Karl Fritscher, Stephanie Mangesius, Constantin Eisenschink, Philipp Deisl, Michael Knoflach, Astrid E. Grams, Elke R. Gizewski, Rainer Schubert
arXiv AI
Jul 7

Test-Time Adaptation for EEG Foundation Models: A Systematic Study under Real-World Distribution Shifts

arXiv:2604. 16926v2 Announce Type: replace-cross Abstract: Electroencephalography (EEG) foundation models have shown strong potential for learning generalizable representations from large-scale neural data, yet their clinical deployment is hindered by distribution shifts across clinical settings, devices, and populations.

By Gabriel Jason Lee, Jathurshan Pradeepkumar, Jimeng Sun
arXiv AI
Sep 10

NOAH: Learning the Full Patient Journey. A Longitudinal Multimodal Time-Aware Model for Representation and Forecasting

NOAH is a generative transformer that learns the full multimodal patient journey by integrating bidirectional time and a variational latent space. Trained on over 559 million clinical events from 431,000 hospital visits, it processes medical images, time‑series, numeric signals, categorical events, and both structured and unstructured records. The model supports autoregressive forecasting, zero‑shot classification, and counterfactual intervention simulation, yielding strong performance on clinical outcomes, ICD chapters, comorbidities, and time‑to‑event prediction.

By Tobias Susetzky, Raphael Rehms, Dmitrii Seletkov, \"Ozg\"un Turgut, Michelle Espranita Liman, Lisa Steinhelfer, Rickmer Braren, Daniel Rueckert
arXiv AI
Sep 16

SOTER: A Generative Time-Series Foundation Model for Wearable Human Physiological Signals

SOTER is a generative foundation model designed for wearable physiological time‑series data. It integrates cross‑channel coupling, spectrum‑guided expert specialization, and continuous‑time latent evolution, using a spatial feature‑aware backbone, a PSD‑guided mixture‑of‑experts layer, and a neural controlled differential equation decoder. Trained on 226 billion time points from five public datasets, SOTER outperforms baselines in zero‑shot forecasting, classification, and imputation across six benchmarks, and remains robust to additive noise.

By Fangke Chen, Sirry Chen, Wei Chen, Zhongyu Wei
arXiv Machine Learning
Jul 20

LLM4EHR: Aligning Clinical Time Series with Medical Event Sequences via Large Language Models

arXiv:2607. 15447v1 Announce Type: new Abstract: Recent research in clinical machine learning, focusing on outcome predictions in intensive care unit (ICU), has shifted from bespoke supervised models to foundation models, utilising modern representation learning methods.

By Jingteng Li, Alexander Capstick, Louise Rigny, Iona Biggart, Neil J Sebire, Payam Barnaghi
Hugging Face Trending Papers
Sep 8

NOAH: Learning the Full Patient Journey. A Longitudinal Multimodal Time-Aware Model for Representation and Forecasting

NOAH is a generative transformer that models the entire multimodal patient journey by integrating bidirectional time and a variational latent space to capture continuous, stochastic clinical trajectories. Trained on over 559 million events from 431,000 hospital visits, it processes medical images, time‑series, numeric signals, categorical events, and both structured and unstructured records. The model supports autoregressive forecasting, zero‑shot classification, and counterfactual simulations, yielding strong predictive performance across 15 ICD chapters, 29 comorbidities, and time‑to‑event outcomes.

arXiv AI
Jun 15

A Comparative Study of Deep Learning Architectures for Multi-Horizon Behavioural Forecasting for Mobile Health

arXiv:2606. 14604v1 Announce Type: cross Abstract: Wearable devices and smartphones generate rich behavioural time series that can support proactive health interventions, yet systematic comparisons of modern forecasting architectures for these data are lacking.

By Pavlos Nicolaou, Kleanthis Malialis, Artemis Kontou, Panayiotis Kolios
arXiv AI
Jul 28

Neonatal Hypoxic-ischaemic Encephalopathy Classification from the EEG and HRV Signals Using a Conformer based Masked Autoencoder

arXiv:2607. 23554v1 Announce Type: cross Abstract: In this paper, we propose the MAEConformer, a novel self-supervised learning framework that combines the Conformer architecture with the Masked Autoencoder (MAE) paradigm for large-scale representation learning from unlabelled electroencephalography (EEG) and heart rate variability (HRV) signals.

By Shuwen Yu, William P Marnane, Geraldine B. Boylan, Gordon Lightbody
arXiv Machine Learning
Aug 4

SingLEM: Single-Channel Large EEG Model

arXiv:2509. 17920v2 Announce Type: replace Abstract: Current deep learning models for electroencephalography (EEG) are often task-specific and depend on large labeled datasets, limiting their adaptability.

By Jamiyan Sukhbaatar, Satoshi Imamura, Ibuki Inoue, Shoya Murakami, Kazi Mahmudul Hassan, Seungwoo Han, Ingon Chanpornpakdi, Toshihisa Tanaka