arXiv:2607. 28662v1 Announce Type: new Abstract: Large language models extract entities and relationships from unstructured documents fluently but inconsistently: type vocabularies fracture across documents, the same person surfaces under several name variants, relationships duplicate, and distinct individuals who share a name risk silent conflation.
By Vaibhav Dangaich, Kevin Lewis, Kundeshwar Pundalik
arXiv:2608.23263v1 Announce Type: new
Abstract: The FAIR Digital Object (FDO) framework mandates that metadata attribute values be expressed as persistent identifiers (PIDs) wherever possible, to pro...
By Zeyd Boukhers, Lingxiao Kong, Xenophon Zabulis, Georgios Toubekis
The FAIR Digital Object (FDO) framework mandates that metadata attribute values be expressed as persistent identifiers (PIDs) wherever possible, to produce a fully machine-actionable graph in which ev...
arXiv:2608.23370v1 Announce Type: new
Abstract: Large Language Models (LLMs) recognise patterns but do not natively track the path of exclusions that a coherent discourse demands. When an input rests...
By Aldo Gangemi, Emanuele Bottazzi
The paper introduces an end‑to‑end pipeline that harvests, validates, and models links between scholarly articles and their source code from journals such as JOSS, SoftwareX, and IPOL, as well as SIGMOD ARI reproducibility reports. It produces a curated set of 4,397 DOI‑repository pairs and defines two Wikidata‑based application profiles—one for articles and one for software—aligned with schema.org and CodeMeta. Using these profiles, the authors created 4,182 new Wikidata software items linked to their papers, while only 82 repositories were previously represented, and they demonstrate compatibility with the COAR Notify protocol for future live enrichment.
By Camillo Carlo Pellizzari di San Girolamo, Francesco Tosoni
arXiv:2608. 06331v1 Announce Type: cross Abstract: From natural-language query interfaces to automated report generation, data analysis tools need a description of the data: the real-world entities it contains, which columns function as measures or identifiers, and how tables connect into units of analysis.
By Donna Hooshmand, Shubham Shahi, Cameron Barrie, Abhratanu Dutta, Marko Sterbentz, Harper Pack, Kristian J. Hammond
arXiv:2607. 21610v1 Announce Type: cross Abstract: Schema graphs are an upstream bottleneck of schema-grounded information extraction and knowledge graph construction, yet most extraction systems assume the schema is already available.
By Miaobo Hu, Xiaobo Guo, Shuhao Hu, Bokun Wang, Rui Chen, Xin Wang, Daren Zha, Jun Xiao
arXiv:2607. 24551v1 Announce Type: new Abstract: Maintenance regulations are complex legal texts that are difficult to exploit when addressing a specific case and challenging to integrate into operational systems.
By G{\'e}nesis Montenegro (WIMMICS), Mokhtar Boumedyen Billami (WIMMICS), Catherine Faron (WIMMICS), Fabien Gandon (WIMMICS), Pierre Monnin (WIMMICS)
The paper introduces CodeGraph, an open‑taxonomy knowledge graph that semantically annotates source code by extracting entities such as algorithms, paradigms, design patterns, and application domains from millions of files. Using a specialized large language model and a three‑stage Wikidata linking process, the authors ground these entities in Wikidata and construct a graph with about 158 million nodes and 1 billion typed edges across 14 programming languages. A quality‑assurance protocol combining human evaluation and an LLM‑as‑a‑judge filter quantifies annotation precision.
By Federico Pennino, Andrea Gurioli, Stefano Zacchiroli, Maurizio Gabbrielli, Paolo Ferragina
arXiv:2605. 28965v2 Announce Type: replace Abstract: Linking free-text phenotype descriptions to ontology terms, typically referred to as phenotype annotation, is essential for the cross-study integration of comparative morphological data.
By James P. Balhoff, Hilmar Lapp
arXiv:2607. 16201v1 Announce Type: new Abstract: Ontology engineering remains a critical bottleneck in knowledge-intensive AI systems.
By Sergei Sergienko
arXiv:2608.28642v1 Announce Type: new
Abstract: Knowledge graphs used by agentic systems are often treated as flat stores of extracted triples, with little record of who owns a fact, why it was admit...
By Pranav Bykampadi, Neel Mokaria, Vishesh Narayan, Faizan Wajid, Ashok Agrawala