arXiv AI By Junfei Ling (Institute of Medical Robotics, Shanghai Jiao Tong University), Bangzheng Pu (Institute of Medical Robotics, Shanghai Jiao Tong University), Bingsen Xue (Institute of Medical Robotics, Shanghai Jiao Tong University), Tianle Li (Institute of Data Science, The University of Hong Kong), Ruying Hu (Oriental Pan-Vascular Devices Innovation College, University of Shanghai for Science and Technology), Cheng Jin (Institute of Medical Robotics, Shanghai Jiao Tong University)

DoGMA: A Central-Dogma-Guided Foundation Model for Multi-Omics Alignment and Multi-Task Learning in Oncology

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arXiv:2608. 08148v1 Announce Type: cross Abstract: Attention mechanisms have been widely utilized in modern deep learning, and many existing multi-omics models inherit their conventional use to allow unrestricted bidirectional interactions.

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arXiv AI
Jun 17

Probing, Fusion, and Trustworthiness: A Systematic Evaluation of Foundation Model Representations for Multimodal Cancer Analysis

arXiv:2606. 17115v1 Announce Type: cross Abstract: Foundation models (FMs) have emerged as powerful representation extractors for medical data, yet their generalizability to datasets under distribution shift remains underexplored.

By Jingyu Hu, Giuseppe Tripodi, Reed Naidoo, Sarah F. McGough, Tapabrata Chakraborti
arXiv AI
Jun 30

Data-Efficient Multimodal Alignment for Histopathology-based Molecular Prediction

arXiv:2606. 29949v1 Announce Type: cross Abstract: H&E-stained whole-slide images offer cohort-scale availability and rich spatial context but lack molecular specificity, whereas bulk RNA-seq provides transcriptome-wide resolution at high cost with limited archival availability.

By Dominik Winter, Dominik Vonficht, Lo\"ic Le Bescond, Christian Gebbe, Marco Rosati, Richard J. Chen, Markus Schick, Ross Stewart, Nicolas Brieu