arXiv AI

Visualizing Graph-to-Answer Mechanism Recovery in Materials-Science Hypothesis Generation

arXiv:2608. 04170v1 Announce Type: cross Abstract: AI co-scientists can generate fluent materials-science hypotheses, but fluency does not show that an answer preserves a scientifically meaningful mechanism.

arXiv AI
Aug 26

ReactBench: A Benchmark for Topological Reasoning in MLLMs on Chemical Reaction Diagrams

ReactBench is a benchmark designed to evaluate the structural reasoning abilities of multimodal large language models (MLLMs) using chemical reaction diagrams. The dataset contains 1,618 expert‑annotated question‑answer pairs that test reasoning across four hierarchical task dimensions, from simple endpoint counting to complex topological analysis. Evaluation of 24 MLLMs shows a performance gap of more than 30% between anchor‑based tasks and holistic structural reasoning tasks, indicating that current models struggle with reasoning over branching, converging, and cyclic structures.

By Qiang Xu, Shengyuan Bai, Yu Wang, He Cao, Leqing Chen, Yuanyuan Liu, Bin Feng, Zijing Liu, Yu Li
arXiv AI
Jun 18

Externalizing Research Synthesis and Validation in AI Scientists through a Research Harness

arXiv:2606. 18874v1 Announce Type: new Abstract: AI systems can increasingly automate scientific workflows, but the reasoning that links prior evidence, generated ideas, experiments and final claims often remains implicit inside model inference.

By Zijian Wang, Hanqi Li, Ziyue Yang, Zijian Hu, Shenghan Zuo, Yunzhe Zhang, Da Ma, Danyu Luo, Chenrun Wang, Jing Peng, Tiancheng Huang, Sijia Guo, Huayang Wang, Zichen Zhu, Senyu Han, Yilu Cao, Kai Yu, Lu Chen
arXiv AI
Sep 17

Hypothesis-Driven Autonomous Materials Synthesis with Multimodal LLM Agents

SynAgent is a framework that uses large language model agents to run autonomous experiments while building an explicit, revisable understanding of the synthesis process. Unlike traditional black‑box optimizers, SynAgent generates analysis skills on the fly and reasons multimodally over data such as X‑ray diffraction patterns and electron micrographs. In an 18‑experiment campaign on LiCoO₂ thin‑film deposition, SynAgent produced highly crystalline films and uncovered a sharp temperature threshold and optimal growth window (650–690 °C) for crystallization.

By Izumi Takahara, Kazunori Nishio, Akira Aiba, Shigeru Kobayashi, Takao Nakajima, Taro Hitosugi, Teruyasu Mizoguchi
Hugging Face Trending Papers
Sep 8

Procedural Graphs: Self-Evolving Execution Structures for LLM Agents

The paper introduces the Procedural Graph, a framework that structures procedural knowledge into (procedure, relation, procedure) triplets to guide large language model agents in planning and tool usage. At each decision point, a guidance model uses the local subgraph to bias the agent’s next action, while an LLM refiner self‑evolves the graph by editing its topology based on successful versus failed trajectories. Experiments across datasets and LLMs show that Procedural Graphs consistently outperform memory‑based baselines, and the self‑evolution mechanism further improves performance without manual engineering.

arXiv AI
Sep 10

Procedural Graphs: Self-Evolving Execution Structures for LLM Agents

The paper introduces Procedural Graphs, a framework that structures procedural knowledge for large language model agents as (procedure, relation, procedure) triplets, analogous to knowledge graphs for factual data. At each decision point, a guidance model uses the local subgraph to bias the agent’s next action, while an LLM refiner self‑evolves the graph by comparing failed and successful trajectories, editing its topology to improve performance. Experiments across various datasets, tasks, and LLMs show that Procedural Graphs consistently outperform memory‑based baselines, and the self‑evolution mechanism further enhances results without manual engineering.

By Yuxing Lu, Yicheng Chen, Shanchan Wu, Sercan \"{O}. Ar{\i}k
arXiv AI
Sep 3

Can Coding Agents Reproduce Findings in Computational Materials Science?

The paper introduces AutoMat, a benchmark designed to test large language model (LLM) coding agents on their ability to reproduce claims from computational materials science. AutoMat presents three challenges: reconstructing underspecified procedures, navigating specialized toolchains, and assessing whether the evidence supports a claim. Experiments show that current LLM agents achieve low success rates, with the best setting reaching only 53%, and failures stem mainly from incomplete procedures, methodological deviations, and execution fragility.

By Ziyang Huang, Yi Cao, Ali K. Shargh, Jing Luo, Ruidong Mei, Mohd Zaki, Zhan Liu, Wyatt Bunstine, William Jurayj, Somdatta Goswami, Tyrel McQueen, Michael Shields, Jaafar El-Awady, Paulette Clancy, Benjamin Van Durme, Nicholas Andrews, William Walden, Daniel Khashabi